After years of exploring the best Comino boat tours in Malta, I’ve sailed on just about every type of vessel, from Turkish gullets to catamarans and large ferry-style boats. I’ve also tried popular operators like Supreme, Hornblower, and Seahorse. But for the past five years, one Comino tour has stood out above the rest and I keep coming back to it. I even chose this exact Blue Lagoon boat tour for my birthday this year, which should tell you just how much I love it.
If you’re visiting between June and September, I highly recommend booking the afternoon boat tour to Comino’s Blue Lagoon. It’s the one I always choose, and I’ll explain why later in this guide. Please note: the afternoon tour is my personal favourite, but if you want more time on the water, these day trips are fantastic alternatives.
Not sure the afternoon trip is for you? Don’t worry — the same operator also offers great full-day options:
- 6-hour day tour option or;
- 6-hour Blue Lagoon + additional beach stop in Malta or Gozo (BBQ lunch option offerred on this one too)
Affiliate Disclosure: This post contains affiliate links for travel services I use and love, such as experiences and hotel bookings. If you click and make a booking, I may receive a small commission which helps support this site. This does not affect the price you pay.

Why I Love This Comino Boat Tour (Summary)
- Afternoon tours (June–September) for fewer crowds and sunset views
- Departure from St. Paul’s Bay: shorter, smoother ride than from Sliema
- Comfortable catamaran: stable, wide, cushioned seating
- Consider full-day tours if you want extra water time or a BBQ lunch (same boat tour operator).
Why I Love This Comino Boat Tour (In Depth)
- Departure time – The boat leaves at 5pm, which means the crowds thin out significantly. I hear people complain about the crowds every day, and yes, it’s true but if you go in the afternoon, you won’t believe the difference! Most boat tours run in the morning, with far fewer in the afternoon. It’s absolute bliss: fewer crowds and a stunning sunset. What more could you want? Worried about swimming? Don’t be! Between June and September, the water stays warm, and the weather is generally calm.

- Departure point – It departs from St. Paul’s Bay instead of Sliema, which means a much shorter boat ride, around 45 minutes compared to nearly 2 hours from Sliema. And for context—I actually live in Gzira, just a stone’s throw from Sliema so it’s not about convenience. I simply prefer the experience offered by tours departing from St. Paul’s Bay. They’re just overall better in my opinion.
- The tour lasts 4 hours – Around 2.5 hours spent swimming and relaxing between the Crystal Lagoon and the Blue Lagoon, and about 1.5 hours of travel time to and from Comino. And honestly? Unless you’re planning to hike around the island, that’s plenty of time to enjoy the sea, take in the views, and make the most of the experience. Comino is beautiful but very basic, there are no shops or restaurants, just a few kiosks selling fast food and drinks. So if you’re short on time during your trip to Malta but still want to experience the stunning waters of the Blue Lagoon, this is the perfect tour.
- The boat itself – Yes, it makes a huge difference! This tour uses a modern catamaran that’s wide, stable, and far more comfortable than most. If you’re someone who tends to get seasick, you’ll really appreciate the stability. The extra width also means better seating layouts and actual cushioned seats (not the usual hard plastic or metal benches you’ll find on many other boats). In fact, out of all the major Comino tour operators I’ve tried, this one easily has the most comfortable seating. Plus, the boat is sleek, modern, and really well-maintained. Honestly, the others just don’t compare.

- There are plenty of both sunbathing spots and shaded areas on board, so everyone can relax in their ideal comfort zone.
- Your first stop is the Crystal Lagoon, an equally breathtaking spot that absolutely shouldn’t be missed. Surrounded by dramatic cliffs, shimmering turquoise waters, and hidden sea caves, it’s a magical spot that can only be reached by boat. You’ll be glad you made the stop!

- This tour docks closer to the Blue Lagoon. Every boat has its designated berthing space, and this one just happens to have one of the best spots. That means a much shorter walk along the rocky trail to get to the lagoon itself—especially helpful if you’re carrying bags or traveling with kids.

- Even better, the boat is anchored right in the crystal-clear water, so you can literally jump in and swim straight off the boat without needing to go anywhere. It’s the perfect setup for a relaxed, hassle-free experience.
- The slide from the top deck! It’s such a simple feature, but it adds so much fun to the whole experience. Whether you’re a kid or just a kid at heart, launching yourself into the clear turquoise water from the top deck is a highlight in itself. Trust me!

- There’s also a light commentary on board pointing out the most interesting sights along the way, so you’ll actually know what you’re looking at as you cruise past Malta’s coastline. And to keep the vibe just right, there’s great music playing throughout the trip.
- There’s also a bar on board, so you can sip on a cold drink while taking in the views, and if you get hungry, you’re covered, fast food is served on board too. You’re welcome to bring your own food and drinks, which makes for a perfect little picnic as soon as you dock on Comino.
Curious to learn more about Comino, its stunning beaches, the hiking trail, the camping spot for overnight stays, and the best times to visit outside the busy Summer months? I cover all of that in a detailed blog post right here.
Happy Travels! x
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Affiliate Disclosure: This post contains affiliate links for travel services I use and love, such as experiences and hotel bookings. If you click and make a booking, I may receive a small commission which helps support this site. This does not affect the price you pay.
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